From 9e1c1b1b930031896851b1ed4a15152508327d73 Mon Sep 17 00:00:00 2001 From: Douglas Rumbaugh Date: Tue, 7 Nov 2023 13:35:54 -0500 Subject: Converted WIRS to the new interface --- include/shard/AugBTree.h | 371 +++++++++++++++++++++++++++++ include/shard/WIRS.h | 594 ----------------------------------------------- 2 files changed, 371 insertions(+), 594 deletions(-) create mode 100644 include/shard/AugBTree.h delete mode 100644 include/shard/WIRS.h (limited to 'include/shard') diff --git a/include/shard/AugBTree.h b/include/shard/AugBTree.h new file mode 100644 index 0000000..e32ec64 --- /dev/null +++ b/include/shard/AugBTree.h @@ -0,0 +1,371 @@ +/* + * include/shard/AugBTree.h + * + * Copyright (C) 2023 Dong Xie + * Douglas B. Rumbaugh + * + * All rights reserved. Published under the Modified BSD License. + * + */ +#pragma once + + +#include +#include +#include +#include +#include + +#include "framework/ShardRequirements.h" + +#include "psu-ds/PriorityQueue.h" +#include "util/Cursor.h" +#include "psu-ds/Alias.h" +#include "psu-ds/BloomFilter.h" +#include "util/bf_config.h" + +using psudb::CACHELINE_SIZE; +using psudb::BloomFilter; +using psudb::PriorityQueue; +using psudb::queue_record; +using psudb::Alias; + +namespace de { + +thread_local size_t wirs_cancelations = 0; + +template +struct AugBTreeNode { + struct AugBTreeNode *left, *right; + decltype(R::key) low, high; + decltype(R::weight) weight; + Alias* alias; +}; + +template +class AugBTree { +private: + typedef decltype(R::key) K; + typedef decltype(R::value) V; + typedef decltype(R::weight) W; + +public: + AugBTree(MutableBuffer* buffer) + : m_reccnt(0), m_tombstone_cnt(0), m_total_weight(0), m_root(nullptr) { + m_alloc_size = (buffer->get_record_count() * sizeof(Wrapped)) + (CACHELINE_SIZE - (buffer->get_record_count() * sizeof(Wrapped)) % CACHELINE_SIZE); + assert(m_alloc_size % CACHELINE_SIZE == 0); + m_data = (Wrapped*)std::aligned_alloc(CACHELINE_SIZE, m_alloc_size); + + m_bf = new BloomFilter(BF_FPR, buffer->get_tombstone_count(), BF_HASH_FUNCS); + + size_t offset = 0; + m_reccnt = 0; + auto base = buffer->get_data(); + auto stop = base + buffer->get_record_count(); + + std::sort(base, stop, std::less>()); + + while (base < stop) { + if (!(base->is_tombstone()) && (base + 1) < stop) { + if (base->rec == (base + 1)->rec && (base + 1)->is_tombstone()) { + base += 2; + wirs_cancelations++; + continue; + } + } else if (base->is_deleted()) { + base += 1; + continue; + } + + // FIXME: this shouldn't be necessary, but the tagged record + // bypass doesn't seem to be working on this code-path, so this + // ensures that tagged records from the buffer are able to be + // dropped, eventually. It should only need to be &= 1 + base->header &= 3; + m_data[m_reccnt++] = *base; + m_total_weight+= base->rec.weight; + + if (m_bf && base->is_tombstone()) { + m_tombstone_cnt++; + m_bf->insert(base->rec); + } + + base++; + } + + if (m_reccnt > 0) { + build_wirs_structure(); + } + } + + AugBTree(AugBTree** shards, size_t len) + : m_reccnt(0), m_tombstone_cnt(0), m_total_weight(0), m_root(nullptr) { + std::vector>> cursors; + cursors.reserve(len); + + PriorityQueue> pq(len); + + size_t attemp_reccnt = 0; + size_t tombstone_count = 0; + + for (size_t i = 0; i < len; ++i) { + if (shards[i]) { + auto base = shards[i]->get_data(); + cursors.emplace_back(Cursor{base, base + shards[i]->get_record_count(), 0, shards[i]->get_record_count()}); + attemp_reccnt += shards[i]->get_record_count(); + tombstone_count += shards[i]->get_tombstone_count(); + pq.push(cursors[i].ptr, i); + } else { + cursors.emplace_back(Cursor>{nullptr, nullptr, 0, 0}); + } + } + + m_bf = new BloomFilter(BF_FPR, tombstone_count, BF_HASH_FUNCS); + + m_alloc_size = (attemp_reccnt * sizeof(Wrapped)) + (CACHELINE_SIZE - (attemp_reccnt * sizeof(Wrapped)) % CACHELINE_SIZE); + assert(m_alloc_size % CACHELINE_SIZE == 0); + m_data = (Wrapped*)std::aligned_alloc(CACHELINE_SIZE, m_alloc_size); + + while (pq.size()) { + auto now = pq.peek(); + auto next = pq.size() > 1 ? pq.peek(1) : queue_record>{nullptr, 0}; + if (!now.data->is_tombstone() && next.data != nullptr && + now.data->rec == next.data->rec && next.data->is_tombstone()) { + + pq.pop(); pq.pop(); + auto& cursor1 = cursors[now.version]; + auto& cursor2 = cursors[next.version]; + if (advance_cursor>(cursor1)) pq.push(cursor1.ptr, now.version); + if (advance_cursor>(cursor2)) pq.push(cursor2.ptr, next.version); + } else { + auto& cursor = cursors[now.version]; + if (!cursor.ptr->is_deleted()) { + m_data[m_reccnt++] = *cursor.ptr; + m_total_weight += cursor.ptr->rec.weight; + if (m_bf && cursor.ptr->is_tombstone()) { + ++m_tombstone_cnt; + if (m_bf) m_bf->insert(cursor.ptr->rec); + } + } + pq.pop(); + + if (advance_cursor>(cursor)) pq.push(cursor.ptr, now.version); + } + } + + if (m_reccnt > 0) { + build_wirs_structure(); + } + } + + ~AugBTree() { + if (m_data) free(m_data); + for (size_t i=0; i *point_lookup(const R &rec, bool filter=false) { + if (filter && !m_bf->lookup(rec)) { + return nullptr; + } + + size_t idx = get_lower_bound(rec.key); + if (idx >= m_reccnt) { + return nullptr; + } + + while (idx < m_reccnt && m_data[idx].rec < rec) ++idx; + + if (m_data[idx].rec == rec) { + return m_data + idx; + } + + return nullptr; + } + + Wrapped* get_data() const { + return m_data; + } + + size_t get_record_count() const { + return m_reccnt; + } + + size_t get_tombstone_count() const { + return m_tombstone_cnt; + } + + const Wrapped* get_record_at(size_t idx) const { + if (idx >= m_reccnt) return nullptr; + return m_data + idx; + } + + + size_t get_memory_usage() { + return m_alloc_size + m_node_cnt * sizeof(AugBTreeNode>); + } + + size_t get_aux_memory_usage() { + return 0; + } + + size_t get_lower_bound(const K& key) const { + size_t min = 0; + size_t max = m_reccnt - 1; + + const char * record_key; + while (min < max) { + size_t mid = (min + max) / 2; + + if (key > m_data[mid].rec.key) { + min = mid + 1; + } else { + max = mid; + } + } + + return min; + } + + W find_covering_nodes(K lower_key, K upper_key, std::vector &nodes, std::vector &weights) { + W total_weight = 0; + + /* Simulate a stack to unfold recursion. */ + struct AugBTreeNode* st[64] = {0}; + st[0] = m_root; + size_t top = 1; + while(top > 0) { + auto now = st[--top]; + if (covered_by(now, lower_key, upper_key) || + (now->left == nullptr && now->right == nullptr && intersects(now, lower_key, upper_key))) { + nodes.emplace_back(now); + weights.emplace_back(now->weight); + total_weight += now->weight; + } else { + if (now->left && intersects(now->left, lower_key, upper_key)) st[top++] = now->left; + if (now->right && intersects(now->right, lower_key, upper_key)) st[top++] = now->right; + } + } + + + return total_weight; + } + + Wrapped *get_weighted_sample(K lower_key, K upper_key, void *internal_node, gsl_rng *rng) { + /* k -> sampling: three levels. 1. select a node -> select a fat point -> select a record. */ + + /* first level */ + auto node = (AugBTreeNode*) internal_node; + + /* second level */ + auto fat_point = node->low + node->alias->get(rng); + + /* third level */ + size_t rec_offset = fat_point * m_group_size + m_alias[fat_point]->get(rng); + auto record = m_data + rec_offset; + + /* bounds rejection */ + if (lower_key > record->rec.key || upper_key < record->rec.key) { + return nullptr; + } + + return record; + } + +private: + + bool covered_by(struct AugBTreeNode* node, const K& lower_key, const K& upper_key) { + auto low_index = node->low * m_group_size; + auto high_index = std::min((node->high + 1) * m_group_size - 1, m_reccnt - 1); + return lower_key < m_data[low_index].rec.key && m_data[high_index].rec.key < upper_key; + } + + bool intersects(struct AugBTreeNode* node, const K& lower_key, const K& upper_key) { + auto low_index = node->low * m_group_size; + auto high_index = std::min((node->high + 1) * m_group_size - 1, m_reccnt - 1); + return lower_key < m_data[high_index].rec.key && m_data[low_index].rec.key < upper_key; + } + + void build_wirs_structure() { + m_group_size = std::ceil(std::log(m_reccnt)); + size_t n_groups = std::ceil((double) m_reccnt / (double) m_group_size); + + // Fat point construction + low level alias.... + double sum_weight = 0.0; + std::vector weights; + std::vector group_norm_weight; + size_t i = 0; + size_t group_no = 0; + while (i < m_reccnt) { + double group_weight = 0.0; + group_norm_weight.clear(); + for (size_t k = 0; k < m_group_size && i < m_reccnt; ++k, ++i) { + auto w = m_data[i].rec.weight; + group_norm_weight.emplace_back(w); + group_weight += w; + sum_weight += w; + } + + for (auto& w: group_norm_weight) + if (group_weight) w /= group_weight; + else w = 1.0 / group_norm_weight.size(); + m_alias.emplace_back(new Alias(group_norm_weight)); + + + weights.emplace_back(group_weight); + } + + assert(weights.size() == n_groups); + + m_root = construct_AugBTreeNode(weights, 0, n_groups-1); + } + + struct AugBTreeNode* construct_AugBTreeNode(const std::vector& weights, size_t low, size_t high) { + if (low == high) { + return new AugBTreeNode{nullptr, nullptr, low, high, weights[low], new Alias({1.0})}; + } else if (low > high) return nullptr; + + std::vector node_weights; + W sum = 0; + for (size_t i = low; i < high; ++i) { + node_weights.emplace_back(weights[i]); + sum += weights[i]; + } + + for (auto& w: node_weights) + if (sum) w /= sum; + else w = 1.0 / node_weights.size(); + + m_node_cnt += 1; + size_t mid = (low + high) / 2; + return new AugBTreeNode{construct_AugBTreeNode(weights, low, mid), + construct_AugBTreeNode(weights, mid + 1, high), + low, high, sum, new Alias(node_weights)}; + } + + void free_tree(struct AugBTreeNode* node) { + if (node) { + delete node->alias; + free_tree(node->left); + free_tree(node->right); + delete node; + } + } + + Wrapped* m_data; + std::vector m_alias; + AugBTreeNode* m_root; + W m_total_weight; + size_t m_reccnt; + size_t m_tombstone_cnt; + size_t m_group_size; + size_t m_alloc_size; + size_t m_node_cnt; + BloomFilter *m_bf; +}; +} diff --git a/include/shard/WIRS.h b/include/shard/WIRS.h deleted file mode 100644 index bf29325..0000000 --- a/include/shard/WIRS.h +++ /dev/null @@ -1,594 +0,0 @@ -/* - * include/shard/WIRS.h - * - * Copyright (C) 2023 Dong Xie - * Douglas B. Rumbaugh - * - * All rights reserved. Published under the Modified BSD License. - * - */ -#pragma once - - -#include -#include -#include -#include -#include - -#include "framework/ShardRequirements.h" - -#include "psu-ds/PriorityQueue.h" -#include "util/Cursor.h" -#include "psu-ds/Alias.h" -#include "psu-ds/BloomFilter.h" -#include "util/bf_config.h" - -using psudb::CACHELINE_SIZE; -using psudb::BloomFilter; -using psudb::PriorityQueue; -using psudb::queue_record; -using psudb::Alias; - -namespace de { - -thread_local size_t wirs_cancelations = 0; - -template -struct wirs_query_parms { - decltype(R::key) lower_bound; - decltype(R::key) upper_bound; - size_t sample_size; - gsl_rng *rng; -}; - -template -class WIRSQuery; - -template -struct wirs_node { - struct wirs_node *left, *right; - decltype(R::key) low, high; - decltype(R::weight) weight; - Alias* alias; -}; - -template -struct WIRSState { - decltype(R::weight) total_weight; - std::vector*> nodes; - Alias* top_level_alias; - size_t sample_size; - - WIRSState() { - total_weight = 0; - top_level_alias = nullptr; - } - - ~WIRSState() { - if (top_level_alias) delete top_level_alias; - } -}; - -template -struct WIRSBufferState { - size_t cutoff; - Alias* alias; - std::vector> records; - decltype(R::weight) max_weight; - size_t sample_size; - decltype(R::weight) total_weight; - - ~WIRSBufferState() { - delete alias; - } - -}; - -template -class WIRS { -private: - - typedef decltype(R::key) K; - typedef decltype(R::value) V; - typedef decltype(R::weight) W; - -public: - - // FIXME: there has to be a better way to do this - friend class WIRSQuery; - friend class WIRSQuery; - - WIRS(MutableBuffer* buffer) - : m_reccnt(0), m_tombstone_cnt(0), m_total_weight(0), m_root(nullptr) { - - m_alloc_size = (buffer->get_record_count() * sizeof(Wrapped)) + (CACHELINE_SIZE - (buffer->get_record_count() * sizeof(Wrapped)) % CACHELINE_SIZE); - assert(m_alloc_size % CACHELINE_SIZE == 0); - m_data = (Wrapped*)std::aligned_alloc(CACHELINE_SIZE, m_alloc_size); - - m_bf = new BloomFilter(BF_FPR, buffer->get_tombstone_count(), BF_HASH_FUNCS); - - size_t offset = 0; - m_reccnt = 0; - auto base = buffer->get_data(); - auto stop = base + buffer->get_record_count(); - - std::sort(base, stop, std::less>()); - - while (base < stop) { - if (!(base->is_tombstone()) && (base + 1) < stop) { - if (base->rec == (base + 1)->rec && (base + 1)->is_tombstone()) { - base += 2; - wirs_cancelations++; - continue; - } - } else if (base->is_deleted()) { - base += 1; - continue; - } - - // FIXME: this shouldn't be necessary, but the tagged record - // bypass doesn't seem to be working on this code-path, so this - // ensures that tagged records from the buffer are able to be - // dropped, eventually. It should only need to be &= 1 - base->header &= 3; - m_data[m_reccnt++] = *base; - m_total_weight+= base->rec.weight; - - if (m_bf && base->is_tombstone()) { - m_tombstone_cnt++; - m_bf->insert(base->rec); - } - - base++; - } - - if (m_reccnt > 0) { - build_wirs_structure(); - } - } - - WIRS(WIRS** shards, size_t len) - : m_reccnt(0), m_tombstone_cnt(0), m_total_weight(0), m_root(nullptr) { - std::vector>> cursors; - cursors.reserve(len); - - PriorityQueue> pq(len); - - size_t attemp_reccnt = 0; - size_t tombstone_count = 0; - - for (size_t i = 0; i < len; ++i) { - if (shards[i]) { - auto base = shards[i]->get_data(); - cursors.emplace_back(Cursor{base, base + shards[i]->get_record_count(), 0, shards[i]->get_record_count()}); - attemp_reccnt += shards[i]->get_record_count(); - tombstone_count += shards[i]->get_tombstone_count(); - pq.push(cursors[i].ptr, i); - } else { - cursors.emplace_back(Cursor>{nullptr, nullptr, 0, 0}); - } - } - - m_bf = new BloomFilter(BF_FPR, tombstone_count, BF_HASH_FUNCS); - - m_alloc_size = (attemp_reccnt * sizeof(Wrapped)) + (CACHELINE_SIZE - (attemp_reccnt * sizeof(Wrapped)) % CACHELINE_SIZE); - assert(m_alloc_size % CACHELINE_SIZE == 0); - m_data = (Wrapped*)std::aligned_alloc(CACHELINE_SIZE, m_alloc_size); - - while (pq.size()) { - auto now = pq.peek(); - auto next = pq.size() > 1 ? pq.peek(1) : queue_record>{nullptr, 0}; - if (!now.data->is_tombstone() && next.data != nullptr && - now.data->rec == next.data->rec && next.data->is_tombstone()) { - - pq.pop(); pq.pop(); - auto& cursor1 = cursors[now.version]; - auto& cursor2 = cursors[next.version]; - if (advance_cursor>(cursor1)) pq.push(cursor1.ptr, now.version); - if (advance_cursor>(cursor2)) pq.push(cursor2.ptr, next.version); - } else { - auto& cursor = cursors[now.version]; - if (!cursor.ptr->is_deleted()) { - m_data[m_reccnt++] = *cursor.ptr; - m_total_weight += cursor.ptr->rec.weight; - if (m_bf && cursor.ptr->is_tombstone()) { - ++m_tombstone_cnt; - if (m_bf) m_bf->insert(cursor.ptr->rec); - } - } - pq.pop(); - - if (advance_cursor>(cursor)) pq.push(cursor.ptr, now.version); - } - } - - if (m_reccnt > 0) { - build_wirs_structure(); - } - } - - ~WIRS() { - if (m_data) free(m_data); - for (size_t i=0; i *point_lookup(const R &rec, bool filter=false) { - if (filter && !m_bf->lookup(rec)) { - return nullptr; - } - - size_t idx = get_lower_bound(rec.key); - if (idx >= m_reccnt) { - return nullptr; - } - - while (idx < m_reccnt && m_data[idx].rec < rec) ++idx; - - if (m_data[idx].rec == rec) { - return m_data + idx; - } - - return nullptr; - } - - Wrapped* get_data() const { - return m_data; - } - - size_t get_record_count() const { - return m_reccnt; - } - - size_t get_tombstone_count() const { - return m_tombstone_cnt; - } - - const Wrapped* get_record_at(size_t idx) const { - if (idx >= m_reccnt) return nullptr; - return m_data + idx; - } - - - size_t get_memory_usage() { - return m_alloc_size + m_node_cnt * sizeof(wirs_node>); - } - - size_t get_aux_memory_usage() { - return 0; - } - -private: - - size_t get_lower_bound(const K& key) const { - size_t min = 0; - size_t max = m_reccnt - 1; - - const char * record_key; - while (min < max) { - size_t mid = (min + max) / 2; - - if (key > m_data[mid].rec.key) { - min = mid + 1; - } else { - max = mid; - } - } - - return min; - } - - bool covered_by(struct wirs_node* node, const K& lower_key, const K& upper_key) { - auto low_index = node->low * m_group_size; - auto high_index = std::min((node->high + 1) * m_group_size - 1, m_reccnt - 1); - return lower_key < m_data[low_index].rec.key && m_data[high_index].rec.key < upper_key; - } - - bool intersects(struct wirs_node* node, const K& lower_key, const K& upper_key) { - auto low_index = node->low * m_group_size; - auto high_index = std::min((node->high + 1) * m_group_size - 1, m_reccnt - 1); - return lower_key < m_data[high_index].rec.key && m_data[low_index].rec.key < upper_key; - } - - void build_wirs_structure() { - m_group_size = std::ceil(std::log(m_reccnt)); - size_t n_groups = std::ceil((double) m_reccnt / (double) m_group_size); - - // Fat point construction + low level alias.... - double sum_weight = 0.0; - std::vector weights; - std::vector group_norm_weight; - size_t i = 0; - size_t group_no = 0; - while (i < m_reccnt) { - double group_weight = 0.0; - group_norm_weight.clear(); - for (size_t k = 0; k < m_group_size && i < m_reccnt; ++k, ++i) { - auto w = m_data[i].rec.weight; - group_norm_weight.emplace_back(w); - group_weight += w; - sum_weight += w; - } - - for (auto& w: group_norm_weight) - if (group_weight) w /= group_weight; - else w = 1.0 / group_norm_weight.size(); - m_alias.emplace_back(new Alias(group_norm_weight)); - - - weights.emplace_back(group_weight); - } - - assert(weights.size() == n_groups); - - m_root = construct_wirs_node(weights, 0, n_groups-1); - } - - struct wirs_node* construct_wirs_node(const std::vector& weights, size_t low, size_t high) { - if (low == high) { - return new wirs_node{nullptr, nullptr, low, high, weights[low], new Alias({1.0})}; - } else if (low > high) return nullptr; - - std::vector node_weights; - W sum = 0; - for (size_t i = low; i < high; ++i) { - node_weights.emplace_back(weights[i]); - sum += weights[i]; - } - - for (auto& w: node_weights) - if (sum) w /= sum; - else w = 1.0 / node_weights.size(); - - m_node_cnt += 1; - size_t mid = (low + high) / 2; - return new wirs_node{construct_wirs_node(weights, low, mid), - construct_wirs_node(weights, mid + 1, high), - low, high, sum, new Alias(node_weights)}; - } - - void free_tree(struct wirs_node* node) { - if (node) { - delete node->alias; - free_tree(node->left); - free_tree(node->right); - delete node; - } - } - - Wrapped* m_data; - std::vector m_alias; - wirs_node* m_root; - W m_total_weight; - size_t m_reccnt; - size_t m_tombstone_cnt; - size_t m_group_size; - size_t m_alloc_size; - size_t m_node_cnt; - BloomFilter *m_bf; -}; - - -template -class WIRSQuery { -public: - - constexpr static bool EARLY_ABORT=false; - constexpr static bool SKIP_DELETE_FILTER=false; - - static void *get_query_state(WIRS *wirs, void *parms) { - auto res = new WIRSState(); - decltype(R::key) lower_key = ((wirs_query_parms *) parms)->lower_bound; - decltype(R::key) upper_key = ((wirs_query_parms *) parms)->upper_bound; - - // Simulate a stack to unfold recursion. - double total_weight = 0.0; - struct wirs_node* st[64] = {0}; - st[0] = wirs->m_root; - size_t top = 1; - while(top > 0) { - auto now = st[--top]; - if (wirs->covered_by(now, lower_key, upper_key) || - (now->left == nullptr && now->right == nullptr && wirs->intersects(now, lower_key, upper_key))) { - res->nodes.emplace_back(now); - total_weight += now->weight; - } else { - if (now->left && wirs->intersects(now->left, lower_key, upper_key)) st[top++] = now->left; - if (now->right && wirs->intersects(now->right, lower_key, upper_key)) st[top++] = now->right; - } - } - - std::vector weights; - for (const auto& node: res->nodes) { - weights.emplace_back(node->weight / total_weight); - } - res->total_weight = total_weight; - res->top_level_alias = new Alias(weights); - res->sample_size = 0; - - return res; - } - - static void* get_buffer_query_state(MutableBuffer *buffer, void *parms) { - WIRSBufferState *state = new WIRSBufferState(); - auto parameters = (wirs_query_parms*) parms; - if constexpr (Rejection) { - state->cutoff = buffer->get_record_count() - 1; - state->max_weight = buffer->get_max_weight(); - state->total_weight = buffer->get_total_weight(); - state->sample_size = 0; - return state; - } - - std::vector weights; - - state->cutoff = buffer->get_record_count() - 1; - double total_weight = 0.0; - - for (size_t i = 0; i <= state->cutoff; i++) { - auto rec = buffer->get_data() + i; - - if (rec->rec.key >= parameters->lower_bound && rec->rec.key <= parameters->upper_bound && !rec->is_tombstone() && !rec->is_deleted()) { - weights.push_back(rec->rec.weight); - state->records.push_back(*rec); - total_weight += rec->rec.weight; - } - } - - for (size_t i = 0; i < weights.size(); i++) { - weights[i] = weights[i] / total_weight; - } - - state->total_weight = total_weight; - state->alias = new Alias(weights); - state->sample_size = 0; - - return state; - } - - static void process_query_states(void *query_parms, std::vector &shard_states, std::vector &buff_states) { - // FIXME: need to redo for the buffer vector interface - auto p = (wirs_query_parms *) query_parms; - - std::vector shard_sample_sizes(shard_states.size()+1, 0); - size_t buffer_sz = 0; - - decltype(R::weight) total_weight = 0; - std::vector weights; - for (auto &s : buff_states) { - auto state = (WIRSBufferState *) s; - total_weight += state->total_weight; - weights.push_back(state->total_weight); - } - - for (auto &s : shard_states) { - auto state = (WIRSState *) s; - total_weight += state->total_weight; - weights.push_back(state->total_weight); - } - - std::vector normalized_weights; - for (auto w : weights) { - normalized_weights.push_back((double) w / (double) total_weight); - } - - auto shard_alias = Alias(normalized_weights); - for (size_t i=0; isample_size; i++) { - auto idx = shard_alias.get(p->rng); - if (idx == 0) { - buffer_sz++; - } else { - shard_sample_sizes[idx - 1]++; - } - } - - for (size_t i=0; i *) shard_states[i]; - state->sample_size = shard_sample_sizes[i+1]; - } - } - - - - static std::vector> query(WIRS *wirs, void *q_state, void *parms) { - auto lower_key = ((wirs_query_parms *) parms)->lower_bound; - auto upper_key = ((wirs_query_parms *) parms)->upper_bound; - auto rng = ((wirs_query_parms *) parms)->rng; - - auto state = (WIRSState *) q_state; - auto sample_size = state->sample_size; - - std::vector> result_set; - - if (sample_size == 0) { - return result_set; - } - // k -> sampling: three levels. 1. select a node -> select a fat point -> select a record. - size_t cnt = 0; - size_t attempts = 0; - do { - ++attempts; - // first level.... - auto node = state->nodes[state->top_level_alias->get(rng)]; - // second level... - auto fat_point = node->low + node->alias->get(rng); - // third level... - size_t rec_offset = fat_point * wirs->m_group_size + wirs->m_alias[fat_point]->get(rng); - auto record = wirs->m_data + rec_offset; - - // bounds rejection - if (lower_key > record->rec.key || upper_key < record->rec.key) { - continue; - } - - result_set.emplace_back(*record); - cnt++; - } while (attempts < sample_size); - - return result_set; - } - - static std::vector> buffer_query(MutableBuffer *buffer, void *state, void *parms) { - auto st = (WIRSBufferState *) state; - auto p = (wirs_query_parms *) parms; - - std::vector> result; - result.reserve(st->sample_size); - - if constexpr (Rejection) { - for (size_t i=0; isample_size; i++) { - auto idx = gsl_rng_uniform_int(p->rng, st->cutoff); - auto rec = buffer->get_data() + idx; - - auto test = gsl_rng_uniform(p->rng) * st->max_weight; - - if (test <= rec->rec.weight && rec->rec.key >= p->lower_bound && rec->rec.key <= p->upper_bound) { - result.emplace_back(*rec); - } - } - return result; - } - - for (size_t i=0; isample_size; i++) { - auto idx = st->alias->get(p->rng); - result.emplace_back(st->records[idx]); - } - - return result; - } - - static std::vector merge(std::vector>> &results, void *parms) { - std::vector output; - - for (size_t i=0; i *) state; - delete s; - } - - static void delete_buffer_query_state(void *state) { - auto s = (WIRSBufferState *) state; - delete s; - } - - - //{q.get_buffer_query_state(p, p)}; - //{q.buffer_query(p, p)}; - -}; - -} -- cgit v1.2.3