Concurrency testing and bug fixes

1 files changed, 379 insertions, 0 deletions

diff --git a/tests/include/concurrent_extension.h b/tests/include/concurrent_extension.h
new file mode 100644
index 0000000..86f8e12
--- /dev/null
+++ b/tests/include/concurrent_extension.h
@@ -0,0 +1,379 @@
+/*
+ * tests/include/dynamic_extension.h
+ *
+ * Standardized unit tests for DynamicExtension objects
+ *
+ * Copyright (C) 2023 Douglas Rumbaugh <drumbaugh@psu.edu> 
+ *
+ * Distributed under the Modified BSD License.
+ *
+ * WARNING: This file must be included in the main unit test set
+ *          after the definition of an appropriate Shard, Query, and Rec
+ *          type. In particular, Rec needs to implement the key-value
+ *          pair interface. For other types of record, you'll need to
+ *          use a different set of unit tests.
+ */
+#pragma once
+
+/*
+ * Uncomment these lines temporarily to remove errors in this file
+ * temporarily for development purposes. They should be removed prior
+ * to building, to ensure no duplicate definitions. These includes/defines
+ * should be included in the source file that includes this one, above the
+ * include statement.
+ */
+#include "testing.h"
+#include "framework/DynamicExtension.h"
+#include "framework/scheduling/FIFOScheduler.h"
+#include "shard/ISAMTree.h"
+#include "query/rangequery.h"
+#include <check.h>
+using namespace de;
+typedef DynamicExtension<Rec, ISAMTree<Rec>, rq::Query<ISAMTree<Rec>, Rec>, LayoutPolicy::LEVELING, DeletePolicy::TOMBSTONE, FIFOScheduler> DE;
+
+
+START_TEST(t_create)
+{
+    auto test_de = new DE(100, 1000, 2);
+
+    ck_assert_ptr_nonnull(test_de);
+    ck_assert_int_eq(test_de->get_record_count(), 0);
+    ck_assert_int_eq(test_de->get_height(), 0);
+
+    delete test_de;
+}
+END_TEST
+
+
+START_TEST(t_insert)
+{
+    auto test_de = new DE(100, 1000, 2);
+
+    uint64_t key = 0;
+    uint32_t val = 0;
+    for (size_t i=0; i<100; i++) {
+        Rec r = {key, val};
+        ck_assert_int_eq(test_de->insert(r), 1);
+        key++;
+        val++;
+    }
+
+    ck_assert_int_eq(test_de->get_height(), 0);
+    ck_assert_int_eq(test_de->get_record_count(), 100);
+
+    delete test_de;
+}
+END_TEST
+
+
+START_TEST(t_debug_insert)
+{
+    auto test_de = new DE(100, 1000, 2);
+
+    uint64_t key = 0;
+    uint32_t val = 0;
+    for (size_t i=0; i<1000; i++) {
+        Rec r = {key, val};
+        ck_assert_int_eq(test_de->insert(r), 1);
+        //ck_assert_int_eq(test_de->get_record_count(), i+1);
+        key++;
+        val++;
+    }
+
+    delete test_de;
+}
+END_TEST
+
+
+START_TEST(t_insert_with_mem_merges)
+{
+    auto test_de = new DE(100, 1000, 2);
+
+    uint64_t key = 0;
+    uint32_t val = 0;
+
+    Rec r = {key, val};
+    for (size_t i=0; i<1000; i++) {
+        ck_assert_int_eq(test_de->insert(r), 1);
+        r.key++;
+        r.value++;
+    }
+
+    ck_assert_int_eq(test_de->get_record_count(), 1000);
+
+    test_de->await_next_epoch();
+
+    ck_assert_int_eq(test_de->get_record_count(), 1000);
+
+    /* 
+     * verify that we can fill past the high water mark, potentially
+     * stalling to allow merges to finish as needed.
+     */
+    size_t cnt = 0;
+    do {
+        if (test_de->insert(r)) {
+            r.key++;
+            r.value++;
+            cnt++;
+        } else {
+            sleep(1);
+        }
+    } while (cnt < 10000);
+
+    test_de->await_next_epoch();
+
+    ck_assert_int_eq(test_de->get_record_count(), 11000);
+
+    delete test_de;
+}
+END_TEST
+
+
+START_TEST(t_range_query)
+{
+    auto test_de = new DE(100, 1000, 2);
+    size_t n = 10000;
+
+    std::vector<uint64_t> keys;
+    for (size_t i=0; i<n; i++) {
+        keys.push_back(rand() % 25000);
+    }
+
+    std::random_device rd;
+    std::mt19937 gen{rd()};
+    std::shuffle(keys.begin(), keys.end(), gen);
+
+    size_t i=0;
+    while ( i < keys.size()) {
+        Rec r = {keys[i], (uint32_t) i};
+        if (test_de->insert(r)) {
+            i++;
+        } else {
+            sleep(1);
+        }
+    }
+
+    test_de->await_next_epoch();
+
+    std::sort(keys.begin(), keys.end());
+
+    auto idx = rand() % (keys.size() - 250);
+
+    uint64_t lower_key = keys[idx];
+    uint64_t upper_key = keys[idx + 250];
+
+    rq::Parms<Rec> p;
+    p.lower_bound = lower_key;
+    p.upper_bound = upper_key;
+
+    auto result = test_de->query(&p);
+    auto r = result.get();
+    std::sort(r.begin(), r.end());
+    ck_assert_int_eq(r.size(), 251);
+
+    for (size_t i=0; i<r.size(); i++) {
+        ck_assert_int_eq(r[i].key, keys[idx + i]);
+    }
+
+    delete test_de;
+}
+END_TEST
+
+
+START_TEST(t_tombstone_merging_01)
+{
+    size_t reccnt = 100000;
+    auto test_de = new DE(100, 1000, 2);
+
+    auto rng = gsl_rng_alloc(gsl_rng_mt19937);
+
+    std::set<std::pair<uint64_t, uint32_t>> records; 
+    std::set<std::pair<uint64_t, uint32_t>> to_delete;
+    std::set<std::pair<uint64_t, uint32_t>> deleted;
+
+    while (records.size() < reccnt) {
+        uint64_t key = rand();
+        uint32_t val = rand();
+
+        if (records.find({key, val}) != records.end()) continue;
+
+        records.insert({key, val});
+    }
+
+    size_t deletes = 0;
+    size_t cnt=0;
+    for (auto rec : records) {
+        Rec r = {rec.first, rec.second};
+        while (!test_de->insert(r)) {
+            sleep(1);
+        }
+
+        if (gsl_rng_uniform(rng) < 0.05 && !to_delete.empty()) {
+            std::vector<std::pair<uint64_t, uint32_t>> del_vec;
+            std::sample(to_delete.begin(), to_delete.end(), std::back_inserter(del_vec), 3, std::mt19937{std::random_device{}()});
+
+            for (size_t i=0; i<del_vec.size(); i++) {
+                Rec dr = {del_vec[i].first, del_vec[i].second};
+                while (!test_de->erase(dr)) {
+                    sleep(1);
+                }
+                deletes++;
+                to_delete.erase(del_vec[i]);
+                deleted.insert(del_vec[i]);
+            }
+        }
+
+        if (gsl_rng_uniform(rng) < 0.25 && deleted.find(rec) == deleted.end()) {
+            to_delete.insert(rec);
+        }
+    }
+
+    test_de->await_next_epoch();
+
+    ck_assert(test_de->validate_tombstone_proportion());
+
+    gsl_rng_free(rng);
+    delete test_de;
+}
+END_TEST
+
+DE *create_test_tree(size_t reccnt, size_t memlevel_cnt) {
+    auto rng = gsl_rng_alloc(gsl_rng_mt19937);
+
+    auto test_de = new DE(1000, 10000, 2);
+
+    std::set<Rec> records; 
+    std::set<Rec> to_delete;
+    std::set<Rec> deleted;
+
+    while (records.size() < reccnt) {
+        uint64_t key = rand();
+        uint32_t val = rand();
+
+        if (records.find({key, val}) != records.end()) continue;
+
+        records.insert({key, val});
+    }
+
+    size_t deletes = 0;
+    for (auto rec : records) {
+        ck_assert_int_eq(test_de->insert(rec), 1);
+
+         if (gsl_rng_uniform(rng) < 0.05 && !to_delete.empty()) {
+            std::vector<Rec> del_vec;
+            std::sample(to_delete.begin(), to_delete.end(), std::back_inserter(del_vec), 3, std::mt19937{std::random_device{}()});
+
+            for (size_t i=0; i<del_vec.size(); i++) {
+                test_de->erase(del_vec[i]);
+                deletes++;
+                to_delete.erase(del_vec[i]);
+                deleted.insert(del_vec[i]);
+            }
+        }
+
+        if (gsl_rng_uniform(rng) < 0.25 && deleted.find(rec) == deleted.end()) {
+            to_delete.insert(rec);
+        }
+    }
+
+    gsl_rng_free(rng);
+
+    return test_de;
+}
+
+START_TEST(t_static_structure)
+{
+    auto rng = gsl_rng_alloc(gsl_rng_mt19937);
+
+    size_t reccnt = 100000;
+    auto test_de = new DE(100, 1000, 2);
+
+    std::set<Rec> records; 
+    std::set<Rec> to_delete;
+    std::set<Rec> deleted;
+
+    while (records.size() < reccnt) {
+        uint64_t key = rand();
+        uint32_t val = rand();
+
+        if (records.find({key, val}) != records.end()) continue;
+
+        records.insert({key, val});
+    }
+
+    size_t deletes = 0;
+    size_t t_reccnt = 0;
+    size_t k=0;
+    for (auto rec : records) {
+        k++;
+        while (!test_de->insert(rec)) {
+            sleep(1);
+        }
+        t_reccnt++;
+
+         if (gsl_rng_uniform(rng) < 0.05 && !to_delete.empty()) {
+            std::vector<Rec> del_vec;
+            std::sample(to_delete.begin(), to_delete.end(), std::back_inserter(del_vec), 3, std::mt19937{std::random_device{}()});
+
+            for (size_t i=0; i<del_vec.size(); i++) {
+                while (!test_de->erase(del_vec[1])) {
+                    sleep(1);
+                }
+
+                deletes++;
+                to_delete.erase(del_vec[i]);
+                deleted.insert(del_vec[i]);
+            }
+        }
+
+        if (gsl_rng_uniform(rng) < 0.25 && deleted.find(rec) == deleted.end()) {
+            to_delete.insert(rec);
+        }
+    }
+
+    auto flat = test_de->create_static_structure();
+    ck_assert_int_eq(flat->get_record_count(), reccnt - deletes);
+
+    uint64_t prev_key = 0;
+    for (size_t i=0; i<flat->get_record_count(); i++) {
+        auto k = flat->get_record_at(i)->rec.key;
+        ck_assert_int_ge(k, prev_key);
+        prev_key = k;
+    }
+
+    gsl_rng_free(rng);
+    delete flat;
+    delete test_de;
+}
+END_TEST
+
+
+static void inject_dynamic_extension_tests(Suite *suite) {
+    TCase *create = tcase_create("de::DynamicExtension::constructor Testing");
+    tcase_add_test(create, t_create);
+    suite_add_tcase(suite, create);
+
+    TCase *insert = tcase_create("de::DynamicExtension::insert Testing");
+    tcase_add_test(insert, t_insert);
+    tcase_add_test(insert, t_insert_with_mem_merges);
+    tcase_add_test(insert, t_debug_insert);
+    tcase_set_timeout(insert, 500);
+    suite_add_tcase(suite, insert);
+
+    /*
+    TCase *query = tcase_create("de::DynamicExtension::range_query Testing");
+    tcase_add_test(query, t_range_query);
+    suite_add_tcase(suite, query);
+
+    
+    TCase *ts = tcase_create("de::DynamicExtension::tombstone_compaction Testing");
+    tcase_add_test(ts, t_tombstone_merging_01);
+    tcase_set_timeout(ts, 500);
+    suite_add_tcase(suite, ts);
+
+    TCase *flat = tcase_create("de::DynamicExtension::create_static_structure Testing");
+    tcase_add_test(flat, t_static_structure);
+    tcase_set_timeout(flat, 500);
+    suite_add_tcase(suite, flat);
+    */
+}